Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 AP002414.2-201ENST00000591780 3365 ntBASIC16.07■□□□□ 0.16
CHRM1P11229 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRM1P11229 AP000949.1-201ENST00000438328 629 ntBASIC16.07■□□□□ 0.16
CHRM1P11229 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.07■□□□□ 0.16
CHRM1P11229 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRM1P11229 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.07■□□□□ 0.16
CHRM1P11229 MTCYBP28-201ENST00000566728 1132 ntBASIC16.07■□□□□ 0.16
CHRM1P11229 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.07■□□□□ 0.16
CHRM1P11229 AL118508.4-201ENST00000624142 1176 ntBASIC16.07■□□□□ 0.16
CHRM1P11229 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRM1P11229 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRM1P11229 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.07■□□□□ 0.16
CHRM1P11229 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CHRM1P11229 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHRM1P11229 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CHRM1P11229 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM1P11229 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 PDIA3P1-201ENST00000471856 1510 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 REXO1L6P-201ENST00000603433 1515 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 KRT8P22-201ENST00000562317 1415 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 AC083799.1-201ENST00000366451 910 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 BOLA2P3-201ENST00000404566 256 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 AC234783.1-201ENST00000441761 496 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CHRM1P11229 AC092658.1-201ENST00000505836 891 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 AC110760.3-202ENST00000515177 371 ntBASIC16.06■□□□□ 0.16
CHRM1P11229 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.06■□□□□ 0.16
CHRM1P11229 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.06■□□□□ 0.16
CHRM1P11229 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM1P11229 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM1P11229 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM1P11229 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CHRM1P11229 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHRM1P11229 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC16.06■□□□□ 0.16
CHRM1P11229 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.06■□□□□ 0.16
CHRM1P11229 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHRM1P11229 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.05■□□□□ 0.16
CHRM1P11229 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CHRM1P11229 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CHRM1P11229 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms