Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC003102.2-201ENST00000589195 1469 ntBASIC15.98■□□□□ 0.15
FAM228BP0C875 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 SALL4P5-201ENST00000419001 1760 ntBASIC15.98■□□□□ 0.15
FAM228BP0C875 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 AL442647.2-201ENST00000429864 857 ntBASIC15.98■□□□□ 0.15
FAM228BP0C875 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.98■□□□□ 0.15
FAM228BP0C875 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC093004.1-201ENST00000508850 424 ntBASIC15.98■□□□□ 0.15
FAM228BP0C875 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.98■□□□□ 0.15
FAM228BP0C875 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC055876.2-201ENST00000531834 546 ntBASIC15.98■□□□□ 0.15
FAM228BP0C875 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.98■□□□□ 0.15
FAM228BP0C875 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.98■□□□□ 0.15
FAM228BP0C875 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.98■□□□□ 0.15
FAM228BP0C875 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC008761.3-201ENST00000624803 892 ntBASIC15.98■□□□□ 0.15
FAM228BP0C875 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 CICP16-201ENST00000502609 2813 ntBASIC15.98■□□□□ 0.15
FAM228BP0C875 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FAM228BP0C875 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.98■□□□□ 0.15
FAM228BP0C875 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FAM228BP0C875 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.97■□□□□ 0.15
FAM228BP0C875 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
FAM228BP0C875 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
FAM228BP0C875 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
FAM228BP0C875 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.97■□□□□ 0.15
FAM228BP0C875 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
FAM228BP0C875 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.97■□□□□ 0.15
FAM228BP0C875 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.97■□□□□ 0.15
FAM228BP0C875 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 UGT1A2P-201ENST00000454886 866 ntBASIC15.97■□□□□ 0.15
FAM228BP0C875 AC104596.2-201ENST00000512793 793 ntBASIC15.97■□□□□ 0.15
FAM228BP0C875 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.97■□□□□ 0.15
FAM228BP0C875 AC092552.1-201ENST00000547243 906 ntBASIC15.97■□□□□ 0.15
FAM228BP0C875 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.97■□□□□ 0.15
FAM228BP0C875 AC138761.1-201ENST00000584393 385 ntBASIC15.97■□□□□ 0.15
FAM228BP0C875 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.97■□□□□ 0.15
FAM228BP0C875 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.97■□□□□ 0.15
FAM228BP0C875 AC004466.1-201ENST00000599515 1080 ntBASIC15.97■□□□□ 0.15
FAM228BP0C875 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FAM228BP0C875 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FAM228BP0C875 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.97■□□□□ 0.15
FAM228BP0C875 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms