Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 AL157414.3-201ENST00000624276 1954 ntBASIC16.3■□□□□ 0.2
CCDC172P0C7W6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 SPDYE18-201ENST00000510091 1050 ntBASIC16.3■□□□□ 0.2
CCDC172P0C7W6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CCDC172P0C7W6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AC104596.2-201ENST00000512793 793 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AC104794.3-201ENST00000566840 1248 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 AC093512.1-201ENST00000617969 520 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 BX539320.1-201ENST00000623759 877 ntBASIC16.29■□□□□ 0.2
CCDC172P0C7W6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC172P0C7W6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 AC126335.2-201ENST00000623362 4637 ntBASIC16.28■□□□□ 0.2
CCDC172P0C7W6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms