Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 AL161772.1-201ENST00000610494 4412 ntBASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB40ALP0C0E4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 AL008707.1-201ENST00000422498 534 ntBASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 AC090616.6-203ENST00000579186 1945 ntBASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 OR2I1P-210ENST00000642037 4691 ntBASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB40ALP0C0E4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 KRT8P29-201ENST00000420409 1371 ntBASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AL451050.2-201ENST00000606967 682 ntBASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AC138649.2-201ENST00000615886 705 ntBASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 LINC01101-201ENST00000622953 1884 ntBASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40ALP0C0E4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms