Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
HOXC6P09630 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HOXC6P09630 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXC6P09630 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HOXC6P09630 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.73■□□□□ 0.27
HOXC6P09630 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.73■□□□□ 0.27
HOXC6P09630 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HOXC6P09630 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HOXC6P09630 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.73■□□□□ 0.27
HOXC6P09630 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 AP000358.1-201ENST00000456260 156 ntBASIC16.73■□□□□ 0.27
HOXC6P09630 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.73■□□□□ 0.27
HOXC6P09630 CTBP2P4-201ENST00000513884 920 ntBASIC16.73■□□□□ 0.27
HOXC6P09630 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.73■□□□□ 0.27
HOXC6P09630 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.73■□□□□ 0.27
HOXC6P09630 AC007881.3-201ENST00000608897 607 ntBASIC16.73■□□□□ 0.27
HOXC6P09630 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.73■□□□□ 0.27
HOXC6P09630 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.73■□□□□ 0.27
HOXC6P09630 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 AP000845.1-201ENST00000581677 2131 ntBASIC16.73■□□□□ 0.27
HOXC6P09630 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.73■□□□□ 0.27
HOXC6P09630 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HOXC6P09630 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HOXC6P09630 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 C18orf15-201ENST00000623680 2534 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 PPT1-215ENST00000641471 2368 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 AC015909.3-201ENST00000572855 1794 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 AL512430.1-201ENST00000392575 860 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 KRT18P36-201ENST00000411618 1276 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 BANF1P3-201ENST00000412556 261 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 RPL13AP19-201ENST00000434320 584 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.72■□□□□ 0.27
HOXC6P09630 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 RBM8B-201ENST00000555532 525 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
HOXC6P09630 RPL17P45-201ENST00000586289 509 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.72■□□□□ 0.27
HOXC6P09630 SIGLEC18P-201ENST00000602271 909 ntBASIC16.72■□□□□ 0.27
HOXC6P09630 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.72■□□□□ 0.27
HOXC6P09630 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
HOXC6P09630 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms