Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC104794.3-201ENST00000566840 1248 ntBASIC13.14□□□□□ -0.31
SFTPBP07988 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.14□□□□□ -0.31
SFTPBP07988 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 AC025181.2-201ENST00000606994 802 ntBASIC13.14□□□□□ -0.31
SFTPBP07988 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.14□□□□□ -0.31
SFTPBP07988 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.14□□□□□ -0.31
SFTPBP07988 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.14□□□□□ -0.31
SFTPBP07988 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.14□□□□□ -0.31
SFTPBP07988 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.14□□□□□ -0.31
SFTPBP07988 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.14□□□□□ -0.31
SFTPBP07988 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SFTPBP07988 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SFTPBP07988 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.14□□□□□ -0.31
SFTPBP07988 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 AL121723.1-201ENST00000445194 1519 ntBASIC13.13□□□□□ -0.31
SFTPBP07988 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.13□□□□□ -0.31
SFTPBP07988 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 TOMM22P5-201ENST00000416399 439 ntBASIC13.13□□□□□ -0.31
SFTPBP07988 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.13□□□□□ -0.31
SFTPBP07988 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 SPTLC1P1-201ENST00000447199 261 ntBASIC13.13□□□□□ -0.31
SFTPBP07988 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.13□□□□□ -0.31
SFTPBP07988 SPDYE18-201ENST00000510091 1050 ntBASIC13.13□□□□□ -0.31
SFTPBP07988 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.13□□□□□ -0.31
SFTPBP07988 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.13□□□□□ -0.31
SFTPBP07988 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.13□□□□□ -0.31
SFTPBP07988 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SFTPBP07988 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.13□□□□□ -0.31
SFTPBP07988 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SFTPBP07988 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SFTPBP07988 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SFTPBP07988 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SFTPBP07988 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms