Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.36□□□□□ -0.27
APOC1P02654 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.36□□□□□ -0.27
APOC1P02654 RRP7BP-205ENST00000566851 833 ntBASIC13.36□□□□□ -0.27
APOC1P02654 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 AL390754.1-201ENST00000619088 582 ntBASIC13.36□□□□□ -0.27
APOC1P02654 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
APOC1P02654 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.36□□□□□ -0.27
APOC1P02654 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.36□□□□□ -0.27
APOC1P02654 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 LILRP1-201ENST00000444199 1370 ntBASIC13.35□□□□□ -0.27
APOC1P02654 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
APOC1P02654 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 DUX4L27-201ENST00000554796 1261 ntBASIC13.35□□□□□ -0.27
APOC1P02654 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
APOC1P02654 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.35□□□□□ -0.27
APOC1P02654 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.35□□□□□ -0.27
APOC1P02654 AC093813.1-201ENST00000605066 256 ntBASIC13.35□□□□□ -0.27
APOC1P02654 AC139530.3-201ENST00000620344 690 ntBASIC13.35□□□□□ -0.27
APOC1P02654 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
APOC1P02654 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 DGCR9-201ENST00000609630 2415 ntBASIC13.35□□□□□ -0.27
APOC1P02654 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
APOC1P02654 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOC1P02654 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.35□□□□□ -0.27
APOC1P02654 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 AL360270.3-201ENST00000609118 1348 ntBASIC13.35□□□□□ -0.27
APOC1P02654 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOC1P02654 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
APOC1P02654 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOC1P02654 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms