Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 AC073621.1-201ENST00000392730 636 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 FGFR3P6-201ENST00000457012 610 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.91□□□□□ -0.5
IFNA1P01562 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.91□□□□□ -0.5
IFNA1P01562 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.91□□□□□ -0.5
IFNA1P01562 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.91□□□□□ -0.5
IFNA1P01562 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.91□□□□□ -0.5
IFNA1P01562 AC008608.2-201ENST00000606089 416 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 AC026979.3-201ENST00000607315 403 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.91□□□□□ -0.5
IFNA1P01562 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.91□□□□□ -0.5
IFNA1P01562 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 AL645728.2-202ENST00000641679 227 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 AL139385.1-201ENST00000611744 3272 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.91□□□□□ -0.5
IFNA1P01562 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 AC020658.7-201ENST00000624274 2442 ntBASIC11.91□□□□□ -0.5
IFNA1P01562 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.91□□□□□ -0.5
IFNA1P01562 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
IFNA1P01562 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
IFNA1P01562 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
IFNA1P01562 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
IFNA1P01562 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
IFNA1P01562 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.9□□□□□ -0.5
IFNA1P01562 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.9□□□□□ -0.5
IFNA1P01562 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.9□□□□□ -0.5
IFNA1P01562 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.9□□□□□ -0.5
IFNA1P01562 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.9□□□□□ -0.5
IFNA1P01562 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.9□□□□□ -0.5
IFNA1P01562 OR7E47P-204ENST00000575924 449 ntBASIC11.9□□□□□ -0.5
IFNA1P01562 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.9□□□□□ -0.5
IFNA1P01562 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.9□□□□□ -0.5
IFNA1P01562 AC005593.1-201ENST00000624894 515 ntBASIC11.9□□□□□ -0.5
IFNA1P01562 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
IFNA1P01562 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.9□□□□□ -0.5
IFNA1P01562 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.9□□□□□ -0.5
IFNA1P01562 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
IFNA1P01562 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms