Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 BCL2L12P1-201ENST00000508390 733 ntBASIC21.81■■□□□ 1.08
RAPGEF3O95398 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 APOC1-209ENST00000592885 562 ntTSL 3 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
RAPGEF3O95398 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAPGEF3O95398 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 API5-203ENST00000455725 2257 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 AC092612.1-201ENST00000514501 998 ntBASIC21.8■■□□□ 1.08
RAPGEF3O95398 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 COX5A-205ENST00000568517 582 ntTSL 3 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.8■■□□□ 1.08
RAPGEF3O95398 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAPGEF3O95398 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 MSANTD2P1-201ENST00000445341 1368 ntBASIC21.79■■□□□ 1.08
RAPGEF3O95398 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 MED11-202ENST00000573708 802 ntTSL 2 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC21.79■■□□□ 1.08
RAPGEF3O95398 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 AC006504.5-208ENST00000588784 2401 ntBASIC21.79■■□□□ 1.08
RAPGEF3O95398 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAPGEF3O95398 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC21.79■■□□□ 1.08
RAPGEF3O95398 AC067931.2-201ENST00000623655 2003 ntBASIC21.79■■□□□ 1.08
RAPGEF3O95398 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 WASH7P-201ENST00000488147 1351 ntBASIC21.78■■□□□ 1.08
RAPGEF3O95398 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RAPGEF3O95398 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAPGEF3O95398 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms