Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC009955.4-201ENST00000597192 544 ntBASIC17.8■□□□□ 0.44
MBD4O95243 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.8■□□□□ 0.44
MBD4O95243 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MBD4O95243 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MBD4O95243 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MBD4O95243 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MBD4O95243 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.79■□□□□ 0.44
MBD4O95243 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.79■□□□□ 0.44
MBD4O95243 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MBD4O95243 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 AC067930.6-201ENST00000623257 4947 ntBASIC17.79■□□□□ 0.44
MBD4O95243 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
MBD4O95243 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
MBD4O95243 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MBD4O95243 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.79■□□□□ 0.44
MBD4O95243 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.79■□□□□ 0.44
MBD4O95243 AC006033.1-201ENST00000440505 426 ntBASIC17.79■□□□□ 0.44
MBD4O95243 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.79■□□□□ 0.44
MBD4O95243 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.79■□□□□ 0.44
MBD4O95243 ALG3P1-201ENST00000508806 1114 ntBASIC17.79■□□□□ 0.44
MBD4O95243 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
MBD4O95243 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.79■□□□□ 0.44
MBD4O95243 BX088702.1-201ENST00000610784 235 ntBASIC17.79■□□□□ 0.44
MBD4O95243 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MBD4O95243 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.79■□□□□ 0.44
MBD4O95243 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
MBD4O95243 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MBD4O95243 AL136172.1-201ENST00000598590 1394 ntBASIC17.79■□□□□ 0.44
MBD4O95243 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
MBD4O95243 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD4O95243 FGD5P1-202ENST00000614866 2498 ntBASIC17.78■□□□□ 0.44
MBD4O95243 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MBD4O95243 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD4O95243 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.78■□□□□ 0.44
MBD4O95243 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 POM121L10P-201ENST00000436994 1285 ntBASIC17.78■□□□□ 0.44
MBD4O95243 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD4O95243 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.78■□□□□ 0.44
MBD4O95243 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD4O95243 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.78■□□□□ 0.44
MBD4O95243 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.78■□□□□ 0.44
MBD4O95243 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.78■□□□□ 0.44
MBD4O95243 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.78■□□□□ 0.44
MBD4O95243 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MBD4O95243 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms