Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC4O75487 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC4O75487 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
GPC4O75487 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GPC4O75487 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 AC134915.1-201ENST00000426461 574 ntBASIC15.11■□□□□ 0.01
GPC4O75487 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 AC120045.2-201ENST00000567334 178 ntBASIC15.11■□□□□ 0.01
GPC4O75487 SAMD11P1-201ENST00000571429 661 ntBASIC15.11■□□□□ 0.01
GPC4O75487 MIR3197-201ENST00000582241 73 ntBASIC15.11■□□□□ 0.01
GPC4O75487 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.11■□□□□ 0.01
GPC4O75487 AC008494.3-201ENST00000606615 944 ntBASIC15.11■□□□□ 0.01
GPC4O75487 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.11■□□□□ 0.01
GPC4O75487 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.11■□□□□ 0.01
GPC4O75487 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC4O75487 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 AL138799.1-201ENST00000448213 1675 ntBASIC15.11■□□□□ 0.01
GPC4O75487 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
GPC4O75487 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GPC4O75487 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC4O75487 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC4O75487 AC004066.1-201ENST00000502488 802 ntBASIC15.1■□□□□ 0.01
GPC4O75487 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC4O75487 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC4O75487 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 AC124283.3-201ENST00000570869 594 ntBASIC15.1■□□□□ 0.01
GPC4O75487 CTBP2P3-201ENST00000585629 1255 ntBASIC15.1■□□□□ 0.01
GPC4O75487 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC4O75487 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GPC4O75487 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC4O75487 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 AC093525.8-201ENST00000624099 1342 ntBASIC15.1■□□□□ 0.01
GPC4O75487 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GPC4O75487 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GPC4O75487 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC4O75487 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC4O75487 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC4O75487 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GPC4O75487 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.09■□□□□ 0.01
GPC4O75487 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC4O75487 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 ACE3P-201ENST00000423435 1973 ntBASIC15.09■□□□□ 0.01
GPC4O75487 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
GPC4O75487 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC4O75487 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms