Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 AC003102.2-201ENST00000589195 1469 ntBASIC13.37□□□□□ -0.27
TRAF3IP2O43734 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 AC092933.1-201ENST00000393644 945 ntBASIC13.37□□□□□ -0.27
TRAF3IP2O43734 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 TLE1P1-201ENST00000422965 589 ntBASIC13.37□□□□□ -0.27
TRAF3IP2O43734 AC007969.1-201ENST00000433675 447 ntBASIC13.37□□□□□ -0.27
TRAF3IP2O43734 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 OR2I1P-209ENST00000641730 5365 ntBASIC13.37□□□□□ -0.27
TRAF3IP2O43734 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 BCRP2-202ENST00000447763 634 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 BCRP6-201ENST00000510112 632 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 BCRP7-201ENST00000511549 544 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AC005225.4-201ENST00000557330 545 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AC025279.2-201ENST00000569730 653 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AC012645.4-201ENST00000610691 1061 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 AL138725.1-201ENST00000407347 1314 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 CLUHP2-201ENST00000426660 1303 ntBASIC13.36□□□□□ -0.27
TRAF3IP2O43734 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF3IP2O43734 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms