Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF13O43567 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF13O43567 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF13O43567 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNF13O43567 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF13O43567 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 AL138799.1-201ENST00000448213 1675 ntBASIC13.72□□□□□ -0.21
RNF13O43567 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF13O43567 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
RNF13O43567 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF13O43567 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF13O43567 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 AP001267.2-201ENST00000532619 2086 ntBASIC13.71□□□□□ -0.21
RNF13O43567 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RNF13O43567 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 AL360270.3-201ENST00000609118 1348 ntBASIC13.71□□□□□ -0.21
RNF13O43567 AL157414.3-201ENST00000624276 1954 ntBASIC13.71□□□□□ -0.21
RNF13O43567 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 AC026410.3-201ENST00000514280 936 ntBASIC13.71□□□□□ -0.21
RNF13O43567 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.71□□□□□ -0.21
RNF13O43567 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 AC055876.2-201ENST00000531834 546 ntBASIC13.71□□□□□ -0.21
RNF13O43567 AC027796.2-201ENST00000575326 344 ntBASIC13.71□□□□□ -0.21
RNF13O43567 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF13O43567 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF13O43567 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF13O43567 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF13O43567 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF13O43567 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF13O43567 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF13O43567 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF13O43567 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF13O43567 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF13O43567 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RNF13O43567 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF13O43567 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RNF13O43567 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 AC010327.5-201ENST00000586923 3061 ntBASIC13.7□□□□□ -0.22
RNF13O43567 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RNF13O43567 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF13O43567 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF13O43567 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF13O43567 AC093813.1-201ENST00000605066 256 ntBASIC13.7□□□□□ -0.22
RNF13O43567 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms