Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CYP2T1P-202ENST00000641596 2535 ntBASIC24.84■■□□□ 1.57
CUX2O14529 FAM86FP-201ENST00000338711 969 ntBASIC24.83■■□□□ 1.57
CUX2O14529 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC24.83■■□□□ 1.57
CUX2O14529 RPL18AP15-201ENST00000430258 517 ntBASIC24.83■■□□□ 1.57
CUX2O14529 RNASEH2CP1-201ENST00000454281 502 ntBASIC24.83■■□□□ 1.57
CUX2O14529 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC24.83■■□□□ 1.57
CUX2O14529 AC147876.1-201ENST00000504408 322 ntBASIC24.83■■□□□ 1.57
CUX2O14529 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC24.83■■□□□ 1.57
CUX2O14529 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CUX2O14529 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC24.83■■□□□ 1.57
CUX2O14529 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC24.83■■□□□ 1.57
CUX2O14529 BX088702.1-201ENST00000610784 235 ntBASIC24.83■■□□□ 1.57
CUX2O14529 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC24.83■■□□□ 1.57
CUX2O14529 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC24.83■■□□□ 1.57
CUX2O14529 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC24.83■■□□□ 1.57
CUX2O14529 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CUX2O14529 AC099398.1-201ENST00000567919 2776 ntBASIC24.83■■□□□ 1.57
CUX2O14529 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CUX2O14529 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.56
CUX2O14529 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CUX2O14529 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CUX2O14529 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CUX2O14529 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.56
CUX2O14529 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.56
CUX2O14529 MIR1226-201ENST00000408658 75 ntBASIC24.83■■□□□ 1.56
CUX2O14529 HINT1-205ENST00000508488 703 ntTSL 2 BASIC24.83■■□□□ 1.56
CUX2O14529 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
CUX2O14529 RN7SL300P-201ENST00000582522 318 ntBASIC24.83■■□□□ 1.56
CUX2O14529 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC24.83■■□□□ 1.56
CUX2O14529 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC24.83■■□□□ 1.56
CUX2O14529 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
CUX2O14529 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC24.83■■□□□ 1.56
CUX2O14529 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CUX2O14529 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CUX2O14529 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CUX2O14529 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CUX2O14529 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC24.82■■□□□ 1.56
CUX2O14529 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
CUX2O14529 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CUX2O14529 PSAT1P2-201ENST00000426107 972 ntBASIC24.82■■□□□ 1.56
CUX2O14529 HMGA1P2-201ENST00000430198 324 ntBASIC24.82■■□□□ 1.56
CUX2O14529 CDKN2A-AS1-201ENST00000441769 823 ntBASIC24.82■■□□□ 1.56
CUX2O14529 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CUX2O14529 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC24.82■■□□□ 1.56
CUX2O14529 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC24.82■■□□□ 1.56
CUX2O14529 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC24.82■■□□□ 1.56
CUX2O14529 CLPP-205ENST00000596605 646 ntTSL 2 BASIC24.82■■□□□ 1.56
CUX2O14529 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CUX2O14529 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CUX2O14529 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 AC105250.1-201ENST00000509378 2057 ntBASIC24.81■■□□□ 1.56
CUX2O14529 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CUX2O14529 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC24.81■■□□□ 1.56
CUX2O14529 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC24.81■■□□□ 1.56
CUX2O14529 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
CUX2O14529 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 AL139384.1-201ENST00000612143 3047 ntBASIC24.81■■□□□ 1.56
CUX2O14529 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 AL118508.1-201ENST00000613502 2345 ntBASIC24.81■■□□□ 1.56
CUX2O14529 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 WT1-209ENST00000530998 2421 ntTSL 2 BASIC24.81■■□□□ 1.56
CUX2O14529 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CUX2O14529 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC24.8■■□□□ 1.56
CUX2O14529 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CUX2O14529 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC24.8■■□□□ 1.56
CUX2O14529 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CUX2O14529 PTPA-215ENST00000432124 567 ntTSL 4 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms