Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL21O00585 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL21O00585 MIR6842-201ENST00000612539 65 ntBASIC13.1□□□□□ -0.31
CCL21O00585 AC133540.1-201ENST00000620845 1019 ntBASIC13.1□□□□□ -0.31
CCL21O00585 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 AC025271.4-201ENST00000621477 1726 ntBASIC13.1□□□□□ -0.31
CCL21O00585 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 KRT18P9-201ENST00000604826 1300 ntBASIC13.1□□□□□ -0.31
CCL21O00585 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL21O00585 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL21O00585 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 AC015909.3-201ENST00000572855 1794 ntBASIC13.09□□□□□ -0.31
CCL21O00585 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL21O00585 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CCL21O00585 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CCL21O00585 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL21O00585 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL21O00585 ALG3P1-201ENST00000508806 1114 ntBASIC13.09□□□□□ -0.31
CCL21O00585 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.09□□□□□ -0.31
CCL21O00585 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.09□□□□□ -0.31
CCL21O00585 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CCL21O00585 YRDCP1-201ENST00000621419 643 ntBASIC13.09□□□□□ -0.31
CCL21O00585 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL21O00585 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CCL21O00585 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL21O00585 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCL21O00585 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.31
CCL21O00585 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL21O00585 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL21O00585 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL21O00585 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL21O00585 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL21O00585 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.08□□□□□ -0.31
CCL21O00585 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.08□□□□□ -0.31
CCL21O00585 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCL21O00585 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL21O00585 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCL21O00585 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CCL21O00585 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL21O00585 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms