Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MIR663A-201ENST00000385250 93 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 SLC25A1P2-201ENST00000430693 912 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 HLA-F-220ENST00000434407 884 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 LGR4-203ENST00000480977 492 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FDX2-206ENST00000492239 773 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AC122714.2-201ENST00000502787 707 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AL353719.1-201ENST00000566847 864 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 TK1-205ENST00000590862 642 ntTSL 3 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 SIGLEC29P-201ENST00000599873 1114 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AL590326.2-201ENST00000625139 305 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PFKL-212ENST00000628044 129 ntTSL 3 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 IYD-208ENST00000500320 2158 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AC110048.1-201ENST00000604293 2157 ntBASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 GLP2R-201ENST00000262441 4572 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CHKB-CPT1BH3BT56 AC093525.7-201ENST00000569852 3626 ntBASIC8.25□□□□□ -1.09
CHKB-CPT1BH3BT56 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms