Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HFM1A2PYH4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HFM1A2PYH4 AC064801.2-201ENST00000625052 1303 ntBASIC21.77■■□□□ 1.07
HFM1A2PYH4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HFM1A2PYH4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HFM1A2PYH4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HFM1A2PYH4 HNRNPA1P41-201ENST00000397777 928 ntBASIC21.76■■□□□ 1.07
HFM1A2PYH4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HFM1A2PYH4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HFM1A2PYH4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 LINC01165-201ENST00000445190 1623 ntBASIC21.76■■□□□ 1.07
HFM1A2PYH4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HFM1A2PYH4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC21.75■■□□□ 1.07
HFM1A2PYH4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HFM1A2PYH4 SLC9A7P1-201ENST00000554295 3311 ntBASIC21.75■■□□□ 1.07
HFM1A2PYH4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 AC116345.2-201ENST00000512837 523 ntBASIC21.74■■□□□ 1.07
HFM1A2PYH4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 MIR4754-201ENST00000582477 89 ntBASIC21.74■■□□□ 1.07
HFM1A2PYH4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
HFM1A2PYH4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HFM1A2PYH4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 MIR769-201ENST00000390225 118 ntBASIC21.73■■□□□ 1.07
HFM1A2PYH4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms