Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CTBP2P5-201ENST00000454986 1264 ntBASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AP000845.1-201ENST00000581677 2131 ntBASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC093813.1-201ENST00000605066 256 ntBASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC104581.4-201ENST00000623126 3052 ntBASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC134312.5-201ENST00000568031 1313 ntBASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 INTS4P1-203ENST00000641008 3683 ntBASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 BAATP1-201ENST00000412284 1225 ntBASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AP001582.1-201ENST00000525856 295 ntBASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms