Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FAM58BP-201ENST00000439056 645 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 RN7SL163P-201ENST00000583100 276 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 BNIP3P13-201ENST00000599968 566 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AC138696.2-201ENST00000607376 223 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AL358472.3-201ENST00000608147 415 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AL136301.1-201ENST00000615830 422 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AC002472.3-201ENST00000640124 621 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 TNRC18P2-201ENST00000417666 2714 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AC009090.5-201ENST00000624886 2285 ntBASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSNK1G3Q9Y6M4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 AL157414.3-201ENST00000624276 1954 ntBASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 UPF3AP2-201ENST00000457924 1132 ntBASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 AC008825.2-201ENST00000603374 718 ntBASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.66□□□□□ -0.06
CSNK1G3Q9Y6M4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 REXO1L4P-201ENST00000605109 1937 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSNK1G3Q9Y6M4 CYP46A4P-201ENST00000414953 267 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms