Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 RN7SL258P-201ENST00000478664 300 ntBASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 IMP3P2-201ENST00000489760 475 ntBASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC242376.1-201ENST00000559033 726 ntBASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC079336.7-201ENST00000623428 1078 ntBASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC018629.1-201ENST00000623381 1736 ntBASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 LINC00528-201ENST00000600723 2160 ntBASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 AC020922.3-201ENST00000595064 547 ntBASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 AF254983.2-201ENST00000612331 135 ntBASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNPO2Q9UMS6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYNPO2Q9UMS6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.01■□□□□ 0.31
SYNPO2Q9UMS6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms