Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CICP11-201ENST00000434745 2827 ntBASIC22.72■■□□□ 1.23
RIMBP3Q9UFD9 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 RBM14-205ENST00000443702 732 ntTSL 3 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AC092171.3-201ENST00000610122 2651 ntBASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AC069061.4-201ENST00000581294 1347 ntBASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RIMBP3Q9UFD9 AL031590.1-202ENST00000641466 1737 ntBASIC22.7■■□□□ 1.23
RIMBP3Q9UFD9 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 AC099398.1-201ENST00000567919 2776 ntBASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 KLK8-203ENST00000347619 555 ntTSL 2 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 BX679664.3-201ENST00000414070 555 ntBASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 IQCF4-203ENST00000428561 420 ntBASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 AC005722.1-201ENST00000431878 964 ntBASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 AC113935.1-201ENST00000471722 555 ntBASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 AC112250.1-201ENST00000504640 745 ntBASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 PSME3-213ENST00000592169 826 ntTSL 3 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC22.7■■□□□ 1.22
RIMBP3Q9UFD9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 SSR4-202ENST00000370085 526 ntTSL 2 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 SKA2-205ENST00000580541 689 ntTSL 3 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RIMBP3Q9UFD9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 GYG1-209ENST00000483267 801 ntTSL 2 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 RPL30-213ENST00000523172 274 ntTSL 5 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 FOS-205ENST00000555242 629 ntTSL 2 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms