Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 HLA-K-203ENST00000430151 1046 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AL353779.1-201ENST00000434793 351 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CNN2P2-201ENST00000443536 909 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CNN2P3-201ENST00000450201 906 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 MEIS3P1-201ENST00000495167 958 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AC069120.2-201ENST00000524091 540 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 KRT8P22-201ENST00000562317 1415 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AL596442.2-201ENST00000610240 980 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AL136317.3-201ENST00000618497 906 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AL158212.4-201ENST00000624062 1286 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 MBLAC2-202ENST00000514906 1936 ntBASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CDC42SE2Q9NRR3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 BX842568.4-201ENST00000421222 227 ntBASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.36□□□□□ -0.75
CDC42SE2Q9NRR3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms