Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEBOXQ9HB31 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEBOXQ9HB31 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEBOXQ9HB31 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SEBOXQ9HB31 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.83□□□□□ -0.35
SEBOXQ9HB31 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SEBOXQ9HB31 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 AC107373.2-201ENST00000607735 490 ntBASIC12.83□□□□□ -0.36
SEBOXQ9HB31 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 AC004790.1-201ENST00000612686 536 ntBASIC12.83□□□□□ -0.36
SEBOXQ9HB31 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 ACE3P-201ENST00000423435 1973 ntBASIC12.83□□□□□ -0.36
SEBOXQ9HB31 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEBOXQ9HB31 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AC067750.1-201ENST00000608826 6545 ntBASIC12.82□□□□□ -0.36
SEBOXQ9HB31 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AC134915.1-201ENST00000426461 574 ntBASIC12.82□□□□□ -0.36
SEBOXQ9HB31 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ENPP7P5-201ENST00000541031 1031 ntBASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AC092552.1-201ENST00000547243 906 ntBASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AL096865.1-201ENST00000606796 927 ntBASIC12.82□□□□□ -0.36
SEBOXQ9HB31 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.82□□□□□ -0.36
SEBOXQ9HB31 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms