Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AC092135.3-201ENST00000624151 1846 ntBASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
POLR2J3Q9H1A7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 DRD5P1-201ENST00000456605 1438 ntBASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 MIR1233-2-201ENST00000408138 82 ntBASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 MIR1233-1-201ENST00000408722 82 ntBASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 TSSK5P-201ENST00000423978 907 ntBASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 RARRES2P5-201ENST00000564013 466 ntBASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 SRD5A3P1-201ENST00000603021 949 ntBASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 AC093813.1-201ENST00000605066 256 ntBASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J3Q9H1A7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 AC055811.4-201ENST00000624039 1754 ntBASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 AL603764.1-201ENST00000636452 321 ntBASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms