Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.21□□□□□ -0.46
NKX6-2Q9C056 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NKX6-2Q9C056 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 MRPL20P1-201ENST00000400819 433 ntBASIC12.2□□□□□ -0.46
NKX6-2Q9C056 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 KRT18P31-201ENST00000506277 1292 ntBASIC12.2□□□□□ -0.46
NKX6-2Q9C056 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 AC002347.1-201ENST00000569543 541 ntBASIC12.2□□□□□ -0.46
NKX6-2Q9C056 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 AC111170.3-201ENST00000624282 2464 ntBASIC12.2□□□□□ -0.46
NKX6-2Q9C056 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 AC012531.1-201ENST00000562848 2680 ntBASIC12.2□□□□□ -0.46
NKX6-2Q9C056 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NKX6-2Q9C056 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 PMS2P7-201ENST00000506558 1336 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 POM121L14P-201ENST00000406100 1558 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 RPL5P21-201ENST00000404620 815 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 HMGA1P7-201ENST00000406908 502 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 GPX1P2-201ENST00000429271 606 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 FAM185BP-201ENST00000443595 716 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 AC093827.2-201ENST00000512654 315 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 IGHV3-65-201ENST00000523210 341 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 AC011467.4-201ENST00000594891 528 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 AC107918.4-202ENST00000641623 219 ntBASIC12.19□□□□□ -0.46
NKX6-2Q9C056 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
NKX6-2Q9C056 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms