Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC234582.1-206ENST00000430312 845 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 SETP5-201ENST00000437270 562 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 YBX1P1-201ENST00000445822 960 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC098613.1-201ENST00000451485 656 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 DUBR-203ENST00000473550 738 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC090058.1-201ENST00000498788 435 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 TMA16-208ENST00000513134 747 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 RN7SKP141-201ENST00000516167 338 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC022868.1-201ENST00000517767 391 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 SUMO2P19-201ENST00000518920 295 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 OR7E10P-201ENST00000526420 991 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 NDUFA12-206ENST00000547986 487 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 PHBP21-201ENST00000562636 823 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC244090.2-201ENST00000567614 792 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 HNRNPA1P16-201ENST00000575692 955 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 PRR13P5-201ENST00000596581 442 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 SNRPGP17-201ENST00000603780 214 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC116003.3-201ENST00000612669 541 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AP003400.2-201ENST00000624036 666 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 ABBA01000935.2-201ENST00000637477 838 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 Z95114.2-201ENST00000623490 2205 ntBASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 AKT3-204ENST00000366540 1575 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC9.71□□□□□ -0.86
KRTAP3-3Q9BYR6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC00304-203ENST00000565008 1864 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC127024.8-201ENST00000623719 2094 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 DSCR4-201ENST00000328264 1098 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-1090P-201ENST00000364065 94 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC019178.1-201ENST00000392337 440 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AL356432.1-201ENST00000405809 419 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RN7SKP68-201ENST00000411055 307 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RSU1P3-201ENST00000412878 835 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 SPDYE21P-201ENST00000413323 827 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 TPMTP2-201ENST00000414372 726 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RPSAP2-201ENST00000416785 888 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 HIGD1AP12-201ENST00000427832 281 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 MPRIP-AS1-201ENST00000428367 1058 ntTSL 3 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL31P54-201ENST00000429803 370 ntBASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP3-3Q9BYR6 AL354893.1-201ENST00000433735 348 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms