Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC19.19■□□□□ 0.66
ABCA3Q99758 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 AP003680.1-201ENST00000598970 3660 ntBASIC19.19■□□□□ 0.66
ABCA3Q99758 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.19■□□□□ 0.66
ABCA3Q99758 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ABCA3Q99758 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 AC092570.1-201ENST00000414446 469 ntBASIC19.19■□□□□ 0.66
ABCA3Q99758 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC19.19■□□□□ 0.66
ABCA3Q99758 EEF1DP5-201ENST00000431410 772 ntBASIC19.19■□□□□ 0.66
ABCA3Q99758 SEPHS2P1-201ENST00000511618 1162 ntBASIC19.19■□□□□ 0.66
ABCA3Q99758 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC19.19■□□□□ 0.66
ABCA3Q99758 PMEL-214ENST00000550447 901 ntTSL 3 BASIC19.19■□□□□ 0.66
ABCA3Q99758 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC19.19■□□□□ 0.66
ABCA3Q99758 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 AL136982.5-201ENST00000605222 294 ntBASIC19.19■□□□□ 0.66
ABCA3Q99758 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC19.19■□□□□ 0.66
ABCA3Q99758 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.19■□□□□ 0.66
ABCA3Q99758 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC19.19■□□□□ 0.66
ABCA3Q99758 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.19■□□□□ 0.66
ABCA3Q99758 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ABCA3Q99758 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA3Q99758 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.18■□□□□ 0.66
ABCA3Q99758 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCA3Q99758 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCA3Q99758 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.18■□□□□ 0.66
ABCA3Q99758 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 TMBIM7P-203ENST00000641617 1718 ntBASIC19.18■□□□□ 0.66
ABCA3Q99758 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCA3Q99758 AC006987.1-201ENST00000413610 527 ntBASIC19.18■□□□□ 0.66
ABCA3Q99758 PSAT1P2-201ENST00000426107 972 ntBASIC19.18■□□□□ 0.66
ABCA3Q99758 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCA3Q99758 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCA3Q99758 ANKRD26P1-203ENST00000569528 966 ntBASIC19.18■□□□□ 0.66
ABCA3Q99758 GAS7-216ENST00000583882 553 ntTSL 5 BASIC19.18■□□□□ 0.66
ABCA3Q99758 TYMSP2-201ENST00000589501 424 ntBASIC19.18■□□□□ 0.66
ABCA3Q99758 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC19.18■□□□□ 0.66
ABCA3Q99758 AC091769.1-201ENST00000619576 568 ntBASIC19.18■□□□□ 0.66
ABCA3Q99758 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC19.18■□□□□ 0.66
ABCA3Q99758 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ABCA3Q99758 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ABCA3Q99758 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.18■□□□□ 0.66
ABCA3Q99758 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ABCA3Q99758 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ABCA3Q99758 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 NQO2-204ENST00000380454 851 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC19.17■□□□□ 0.66
ABCA3Q99758 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC19.17■□□□□ 0.66
ABCA3Q99758 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 AC145285.5-201ENST00000562217 361 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 ESR1-214ENST00000638569 132 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 AC138761.6-201ENST00000583997 1423 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 AC015688.4-201ENST00000580780 1647 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ABCA3Q99758 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.17■□□□□ 0.66
ABCA3Q99758 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.17■□□□□ 0.66
ABCA3Q99758 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 BX679664.3-201ENST00000414070 555 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ABCA3Q99758 AC023141.7-201ENST00000430646 407 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 AL161932.2-201ENST00000435436 679 ntBASIC19.17■□□□□ 0.66
ABCA3Q99758 NRADDP-201ENST00000437305 691 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms