Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 AC093752.3-201ENST00000567343 901 ntBASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 MIR557-201ENST00000385239 98 ntBASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 AC064801.2-201ENST00000625052 1303 ntBASIC17.24■□□□□ 0.35
CDK5RAP2Q96SN8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 OR8T1P-201ENST00000421347 918 ntBASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 RN7SL258P-201ENST00000478664 300 ntBASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 CICP24-201ENST00000605464 2705 ntBASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 AP001267.2-201ENST00000532619 2086 ntBASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP2Q96SN8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 MAGEA5-201ENST00000446757 942 ntBASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 NOC2LP1-201ENST00000450578 752 ntBASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP2Q96SN8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms