Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC107918.4-201ENST00000641966 3141 ntBASIC12.23□□□□□ -0.45
RAB40CQ96S21 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 AC015818.8-201ENST00000587907 1519 ntBASIC12.23□□□□□ -0.45
RAB40CQ96S21 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 AC090505.1-201ENST00000430515 1834 ntBASIC12.23□□□□□ -0.45
RAB40CQ96S21 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 YBX2P1-201ENST00000394192 760 ntBASIC12.22□□□□□ -0.45
RAB40CQ96S21 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 AC074338.1-201ENST00000416825 156 ntBASIC12.22□□□□□ -0.45
RAB40CQ96S21 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 DNAJB3-201ENST00000446806 729 ntBASIC12.22□□□□□ -0.45
RAB40CQ96S21 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 MIR6069-201ENST00000620069 79 ntBASIC12.22□□□□□ -0.45
RAB40CQ96S21 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 AC092902.6-201ENST00000641783 218 ntBASIC12.22□□□□□ -0.45
RAB40CQ96S21 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB40CQ96S21 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB40CQ96S21 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms