Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 AC023824.1-201ENST00000562945 2975 ntBASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 AC007326.1-201ENST00000604539 458 ntBASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 AC002044.2-201ENST00000624910 970 ntBASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.76■□□□□ 0.59
TUBGCP6Q96RT7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 AP000911.2-201ENST00000534330 502 ntBASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 AC008825.2-201ENST00000603374 718 ntBASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBGCP6Q96RT7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AC114947.1-202ENST00000514136 344 ntBASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AC012073.1-201ENST00000606114 1108 ntBASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 MARK2P16-201ENST00000605714 1723 ntBASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms