Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AC005562.1-201ENST00000583030 3219 ntBASIC13.38□□□□□ -0.27
RFT1Q96AA3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AC112482.1-201ENST00000492080 688 ntBASIC13.38□□□□□ -0.27
RFT1Q96AA3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 YBX1P5-201ENST00000509441 847 ntBASIC13.38□□□□□ -0.27
RFT1Q96AA3 AP000344.2-201ENST00000512987 629 ntBASIC13.38□□□□□ -0.27
RFT1Q96AA3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AC007967.4-201ENST00000614700 386 ntBASIC13.38□□□□□ -0.27
RFT1Q96AA3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RFT1Q96AA3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFT1Q96AA3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AP000845.1-201ENST00000581677 2131 ntBASIC13.37□□□□□ -0.27
RFT1Q96AA3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 FO393414.2-201ENST00000405153 598 ntBASIC13.37□□□□□ -0.27
RFT1Q96AA3 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 SPDYE17-201ENST00000412399 783 ntBASIC13.37□□□□□ -0.27
RFT1Q96AA3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AC023141.5-201ENST00000458585 616 ntBASIC13.37□□□□□ -0.27
RFT1Q96AA3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AL589739.1-201ENST00000607720 493 ntBASIC13.37□□□□□ -0.27
RFT1Q96AA3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms