Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
USP9XQ93008 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
USP9XQ93008 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 ERP29P1-201ENST00000442902 706 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 AC006529.1-201ENST00000459978 637 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC12.8□□□□□ -0.36
USP9XQ93008 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.8□□□□□ -0.36
USP9XQ93008 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.8□□□□□ -0.36
USP9XQ93008 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
USP9XQ93008 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 PTGER4P2-201ENST00000328411 252 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 AC108734.2-201ENST00000420887 1069 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.8□□□□□ -0.36
USP9XQ93008 PTGER4P3-201ENST00000458150 252 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 AC013553.1-201ENST00000560906 267 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
USP9XQ93008 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.8□□□□□ -0.36
USP9XQ93008 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 MTHFR-217ENST00000641820 1569 ntBASIC12.8□□□□□ -0.36
USP9XQ93008 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.8□□□□□ -0.36
USP9XQ93008 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC12.8□□□□□ -0.36
USP9XQ93008 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
USP9XQ93008 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 PYY2-201ENST00000315776 282 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 RNVU1-8-201ENST00000364272 125 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.79□□□□□ -0.36
USP9XQ93008 RPS18P9-201ENST00000482817 460 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 RN7SL23P-201ENST00000484055 275 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 RN7SL530P-201ENST00000485097 298 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 AC010632.2-201ENST00000588369 1224 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.79□□□□□ -0.36
USP9XQ93008 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 PHF23-213ENST00000613632 850 ntTSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 AC020904.3-201ENST00000624199 442 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 LINC02447-202ENST00000501888 2146 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
USP9XQ93008 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
USP9XQ93008 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.79□□□□□ -0.36
USP9XQ93008 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
USP9XQ93008 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.79□□□□□ -0.36
USP9XQ93008 BX088702.1-201ENST00000610784 235 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 AC004466.2-201ENST00000614749 516 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.79□□□□□ -0.36
USP9XQ93008 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USP9XQ93008 AC112504.1-201ENST00000623415 1841 ntBASIC12.79□□□□□ -0.36
USP9XQ93008 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms