Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AP3S1Q92572 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 AL133267.1-201ENST00000398220 340 ntBASIC13.26□□□□□ -0.29
AP3S1Q92572 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
AP3S1Q92572 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 RNPS1P1-201ENST00000507437 918 ntBASIC13.26□□□□□ -0.29
AP3S1Q92572 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 MEX3B-202ENST00000558133 4333 ntBASIC13.26□□□□□ -0.29
AP3S1Q92572 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S1Q92572 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S1Q92572 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S1Q92572 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
AP3S1Q92572 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.26□□□□□ -0.29
AP3S1Q92572 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 AC074044.1-201ENST00000609673 707 ntBASIC13.26□□□□□ -0.29
AP3S1Q92572 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AP3S1Q92572 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
AP3S1Q92572 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
AP3S1Q92572 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.25□□□□□ -0.29
AP3S1Q92572 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.25□□□□□ -0.29
AP3S1Q92572 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.25□□□□□ -0.29
AP3S1Q92572 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
AP3S1Q92572 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.25□□□□□ -0.29
AP3S1Q92572 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.25□□□□□ -0.29
AP3S1Q92572 AC025181.2-201ENST00000606994 802 ntBASIC13.25□□□□□ -0.29
AP3S1Q92572 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AP3S1Q92572 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
AP3S1Q92572 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP3S1Q92572 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AP3S1Q92572 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP3S1Q92572 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S1Q92572 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S1Q92572 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.24□□□□□ -0.29
AP3S1Q92572 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms