Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 AC092910.2-201ENST00000491262 348 ntBASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 RN7SL440P-201ENST00000577855 343 ntBASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRUNE2Q8WUY3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 MIR645-201ENST00000385283 94 ntBASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 AC022447.5-201ENST00000504817 392 ntBASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 CICP23-201ENST00000605013 2741 ntBASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 BRD7P5-201ENST00000299197 1822 ntBASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 AC105250.1-201ENST00000509378 2057 ntBASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRUNE2Q8WUY3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 PEBP1P3-201ENST00000455475 548 ntBASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 AC132872.4-202ENST00000622924 2756 ntBASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 AL136172.1-201ENST00000598590 1394 ntBASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 AL773545.2-201ENST00000442149 472 ntBASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 MIR4746-201ENST00000579802 71 ntBASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 AC090616.6-203ENST00000579186 1945 ntBASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRUNE2Q8WUY3 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AL157823.1-201ENST00000403727 628 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 RPL18AP8-201ENST00000486071 528 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 AC005274.1-201ENST00000623460 802 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 PAUPAR-201ENST00000630360 2965 ntBASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRUNE2Q8WUY3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms