Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 AL118516.1-201ENST00000564152 670 ntBASIC17.86■□□□□ 0.45
SNED1Q8TER0 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.86■□□□□ 0.45
SNED1Q8TER0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNED1Q8TER0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 RN7SL470P-201ENST00000583069 259 ntBASIC17.85■□□□□ 0.45
SNED1Q8TER0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNED1Q8TER0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.85■□□□□ 0.45
SNED1Q8TER0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 BAK1P1-201ENST00000317045 636 ntBASIC17.84■□□□□ 0.45
SNED1Q8TER0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 ALG1L13P-202ENST00000519320 584 ntBASIC17.84■□□□□ 0.45
SNED1Q8TER0 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 MIR2392-201ENST00000584881 84 ntBASIC17.84■□□□□ 0.45
SNED1Q8TER0 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 AC008741.2-201ENST00000612792 3115 ntBASIC17.84■□□□□ 0.45
SNED1Q8TER0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNED1Q8TER0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.84■□□□□ 0.45
SNED1Q8TER0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 AC105917.1-201ENST00000506637 2539 ntBASIC17.83■□□□□ 0.45
SNED1Q8TER0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.83■□□□□ 0.45
SNED1Q8TER0 MIR645-201ENST00000385283 94 ntBASIC17.83■□□□□ 0.45
SNED1Q8TER0 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms