Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 RAB43P1-201ENST00000561790 589 ntBASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDH19Q8TAB3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 AL138725.1-201ENST00000407347 1314 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 RN7SKP230-201ENST00000365642 335 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 POM121L8P-201ENST00000417732 1281 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 TLE1P1-201ENST00000422965 589 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 POM121L9P-203ENST00000441984 1285 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 TPT1P11-201ENST00000458482 498 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 AC106760.1-201ENST00000508690 800 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 AP001889.1-201ENST00000525414 633 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 AC106886.1-201ENST00000568660 600 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 AC015802.1-201ENST00000588104 1449 ntBASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDH19Q8TAB3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 CLUHP2-201ENST00000426660 1303 ntBASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDH19Q8TAB3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms