Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 AC007787.1-201ENST00000588095 1583 ntBASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PIK3C3Q8NEB9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AL080243.2-201ENST00000418783 582 ntBASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 SERBP1P3-201ENST00000459980 809 ntBASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AC069120.2-201ENST00000524091 540 ntBASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AC140878.1-201ENST00000565277 250 ntBASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AL033527.5-202ENST00000641632 1098 ntBASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AC089987.1-201ENST00000551654 2209 ntBASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PIK3C3Q8NEB9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 AC055811.4-201ENST00000624039 1754 ntBASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 AC015922.1-201ENST00000421102 1152 ntBASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 RPL13P2-201ENST00000440687 659 ntBASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.15□□□□□ -0.14
PIK3C3Q8NEB9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms