Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.22□□□□□ -0.13
SIMC1Q8NDZ2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 AC013726.1-201ENST00000563747 2285 ntBASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 SBF1P1-201ENST00000444527 5631 ntBASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 AC093433.1-201ENST00000458048 571 ntBASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 AL596325.1-201ENST00000563991 1082 ntBASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 PRSS30P-206ENST00000641773 873 ntBASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SIMC1Q8NDZ2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SIMC1Q8NDZ2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SIMC1Q8NDZ2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.21□□□□□ -0.14
SIMC1Q8NDZ2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SIMC1Q8NDZ2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SIMC1Q8NDZ2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 KLF2P2-201ENST00000416807 1039 ntBASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 RN7SL837P-201ENST00000463010 287 ntBASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 AC132938.2-201ENST00000579188 680 ntBASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 AC010319.3-201ENST00000597028 470 ntBASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.2□□□□□ -0.14
SIMC1Q8NDZ2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms