Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 AGPAT5P1-201ENST00000455855 1019 ntBASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 AP001184.1-201ENST00000637936 376 ntBASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC22.8■■□□□ 1.24
CFAP43Q8NDM7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 Z69890.1-201ENST00000382990 339 ntBASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 AP003398.1-201ENST00000531124 318 ntBASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 RN7SL470P-201ENST00000583069 259 ntBASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 MARK2P16-201ENST00000605714 1723 ntBASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CFAP43Q8NDM7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 AC011270.2-201ENST00000624293 2550 ntBASIC22.78■■□□□ 1.24
CFAP43Q8NDM7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 DPY19L2P5-201ENST00000456300 331 ntBASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AC244197.1-201ENST00000456494 951 ntBASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AC084752.1-201ENST00000509766 622 ntBASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AC022447.6-201ENST00000515522 438 ntBASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AC132872.4-202ENST00000622924 2756 ntBASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 KRT17P4-201ENST00000429445 819 ntBASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC22.77■■□□□ 1.24
CFAP43Q8NDM7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms