Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SRP14-204ENST00000558720 780 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AC004554.1-201ENST00000422830 1468 ntBASIC10.15□□□□□ -0.78
CSMD3Q7Z407 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AL592076.1-201ENST00000424448 303 ntBASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AC018846.1-201ENST00000568231 183 ntBASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AP005264.6-204ENST00000588436 719 ntBASIC10.15□□□□□ -0.78
CSMD3Q7Z407 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AC007326.1-201ENST00000604539 458 ntBASIC10.15□□□□□ -0.78
CSMD3Q7Z407 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CSMD3Q7Z407 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 MYB-242ENST00000618728 3545 ntTSL 5 BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 SSR4P1-203ENST00000599569 2260 ntBASIC10.15□□□□□ -0.79
CSMD3Q7Z407 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 ABHD17AP9-201ENST00000561925 548 ntBASIC10.15□□□□□ -0.79
CSMD3Q7Z407 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC10.15□□□□□ -0.79
CSMD3Q7Z407 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AC108734.2-201ENST00000420887 1069 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AC018638.5-201ENST00000450885 754 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 AC108724.1-201ENST00000481669 352 ntBASIC10.14□□□□□ -0.79
CSMD3Q7Z407 NAA40-205ENST00000539656 577 ntTSL 4 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC10.14□□□□□ -0.79
CSMD3Q7Z407 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms