Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 ACTBP8-201ENST00000403258 1108 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 GIMAP3P-201ENST00000495150 836 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AP001063.1-201ENST00000568332 529 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC140912.1-201ENST00000577171 1054 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC008494.3-201ENST00000606615 944 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST2H3AQ71DI3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AL162726.2-201ENST00000438986 1017 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 TP53TG3HP-202ENST00000569755 579 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 MIR4745-201ENST00000577608 62 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AL355385.1-201ENST00000606123 409 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 WFDC1-204ENST00000613603 549 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms