Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 AL359258.3-201ENST00000622910 2331 ntBASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
CCDC149Q6ZUS6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 LINC00554-201ENST00000564841 3011 ntBASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 RPL18P13-201ENST00000478088 569 ntBASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 MIR4750-201ENST00000584564 56 ntBASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 AC012044.1-201ENST00000603431 297 ntBASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 AC018635.2-201ENST00000608625 364 ntBASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 AP003419.4-201ENST00000616071 517 ntBASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC149Q6ZUS6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 ISCA2P1-201ENST00000425548 448 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 AC019193.1-201ENST00000506678 823 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 ALG3P1-201ENST00000508806 1114 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 AC116345.2-201ENST00000512837 523 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 IGLV3-15-201ENST00000518356 244 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 MIR3147-201ENST00000577811 66 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 AC009884.2-201ENST00000603110 324 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 AL132994.2-201ENST00000603120 687 ntBASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC149Q6ZUS6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC149Q6ZUS6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms