Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL355864.2-201ENST00000447420 863 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 AC007551.1-201ENST00000457394 519 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 RHOQP1-201ENST00000555758 579 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 AC025279.2-201ENST00000569730 653 ntBASIC15.78■□□□□ 0.12
RNF43Q68DV7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 ZBED1P1-201ENST00000502364 1930 ntBASIC15.78■□□□□ 0.12
RNF43Q68DV7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF43Q68DV7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF43Q68DV7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 CNN2P8-201ENST00000421872 913 ntBASIC15.77■□□□□ 0.12
RNF43Q68DV7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF43Q68DV7 KRT90P-201ENST00000549264 1064 ntBASIC15.77■□□□□ 0.12
RNF43Q68DV7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF43Q68DV7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms