Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.36■□□□□ 0.53
ATP2B3Q16720 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 AC006058.4-201ENST00000624016 1670 ntBASIC18.36■□□□□ 0.53
ATP2B3Q16720 CICP14-201ENST00000629111 2732 ntBASIC18.36■□□□□ 0.53
ATP2B3Q16720 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B3Q16720 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B3Q16720 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.35■□□□□ 0.53
ATP2B3Q16720 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B3Q16720 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2B3Q16720 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 GPAA1P2-201ENST00000417923 928 ntBASIC18.34■□□□□ 0.53
ATP2B3Q16720 TLE1P1-201ENST00000422965 589 ntBASIC18.34■□□□□ 0.53
ATP2B3Q16720 AL354877.1-201ENST00000424412 413 ntBASIC18.34■□□□□ 0.53
ATP2B3Q16720 POM121L10P-201ENST00000436994 1285 ntBASIC18.34■□□□□ 0.53
ATP2B3Q16720 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 AC005730.2-201ENST00000564549 1184 ntBASIC18.34■□□□□ 0.53
ATP2B3Q16720 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 AL136301.1-201ENST00000615830 422 ntBASIC18.34■□□□□ 0.53
ATP2B3Q16720 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 AC026748.1-201ENST00000624349 3251 ntBASIC18.34■□□□□ 0.53
ATP2B3Q16720 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2B3Q16720 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B3Q16720 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms