Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC093004.1-201ENST00000508850 424 ntBASIC13.08□□□□□ -0.32
UBA52P62987 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.08□□□□□ -0.32
UBA52P62987 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.08□□□□□ -0.32
UBA52P62987 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.08□□□□□ -0.32
UBA52P62987 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 IGHV3-72-202ENST00000621503 303 ntBASIC13.08□□□□□ -0.32
UBA52P62987 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
UBA52P62987 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 U82695.1-201ENST00000635752 1889 ntBASIC13.08□□□□□ -0.32
UBA52P62987 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
UBA52P62987 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
UBA52P62987 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBA52P62987 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.08□□□□□ -0.32
UBA52P62987 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
UBA52P62987 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.07□□□□□ -0.32
UBA52P62987 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.07□□□□□ -0.32
UBA52P62987 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 SPDYE19P-201ENST00000338590 713 ntBASIC13.07□□□□□ -0.32
UBA52P62987 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 AL512384.1-201ENST00000406683 331 ntBASIC13.07□□□□□ -0.32
UBA52P62987 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.07□□□□□ -0.32
UBA52P62987 SERBP1P3-201ENST00000459980 809 ntBASIC13.07□□□□□ -0.32
UBA52P62987 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 DOC2GP-202ENST00000514950 1163 ntBASIC13.07□□□□□ -0.32
UBA52P62987 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 AC010336.2-201ENST00000564226 506 ntBASIC13.07□□□□□ -0.32
UBA52P62987 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.07□□□□□ -0.32
UBA52P62987 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 AC017083.2-201ENST00000608069 979 ntBASIC13.07□□□□□ -0.32
UBA52P62987 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
UBA52P62987 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 DMBT1P1-203ENST00000636837 4628 ntBASIC13.07□□□□□ -0.32
UBA52P62987 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.07□□□□□ -0.32
UBA52P62987 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.07□□□□□ -0.32
UBA52P62987 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.07□□□□□ -0.32
UBA52P62987 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.07□□□□□ -0.32
UBA52P62987 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBA52P62987 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms