Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH13P55290 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 GNAQP1-201ENST00000444815 1067 ntBASIC14.73□□□□□ -0.05
CDH13P55290 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH13P55290 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH13P55290 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CDH13P55290 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 KRT8P14-201ENST00000414254 1442 ntBASIC14.73□□□□□ -0.05
CDH13P55290 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 AC152010.1-201ENST00000415779 2006 ntBASIC14.72□□□□□ -0.05
CDH13P55290 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDH13P55290 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.72□□□□□ -0.05
CDH13P55290 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH13P55290 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.72□□□□□ -0.05
CDH13P55290 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 MIR8072-201ENST00000614241 80 ntBASIC14.72□□□□□ -0.05
CDH13P55290 AC104581.4-201ENST00000623126 3052 ntBASIC14.72□□□□□ -0.05
CDH13P55290 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.72□□□□□ -0.05
CDH13P55290 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH13P55290 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH13P55290 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH13P55290 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CDH13P55290 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH13P55290 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms