Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH11P55287 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH11P55287 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH11P55287 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH11P55287 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH11P55287 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH11P55287 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH11P55287 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDH11P55287 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.83□□□□□ -0.19
CDH11P55287 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.83□□□□□ -0.19
CDH11P55287 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
CDH11P55287 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH11P55287 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH11P55287 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CDH11P55287 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH11P55287 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
CDH11P55287 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.83□□□□□ -0.2
CDH11P55287 AC138969.3-201ENST00000546612 1459 ntBASIC13.83□□□□□ -0.2
CDH11P55287 AC138932.2-201ENST00000548268 1459 ntBASIC13.83□□□□□ -0.2
CDH11P55287 AC126755.4-201ENST00000549796 1459 ntBASIC13.83□□□□□ -0.2
CDH11P55287 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH11P55287 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CDH11P55287 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 AC087499.6-201ENST00000411576 835 ntBASIC13.83□□□□□ -0.2
CDH11P55287 AL353779.1-201ENST00000434793 351 ntBASIC13.83□□□□□ -0.2
CDH11P55287 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 AC114501.2-201ENST00000439631 535 ntBASIC13.83□□□□□ -0.2
CDH11P55287 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH11P55287 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH11P55287 SPDYE18-201ENST00000510091 1050 ntBASIC13.83□□□□□ -0.2
CDH11P55287 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH11P55287 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 AL596325.1-201ENST00000563991 1082 ntBASIC13.83□□□□□ -0.2
CDH11P55287 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH11P55287 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH11P55287 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 AL928921.2-201ENST00000641325 2442 ntBASIC13.83□□□□□ -0.2
CDH11P55287 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH11P55287 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH11P55287 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CDH11P55287 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 PTENP1-202ENST00000532280 3996 ntBASIC13.82□□□□□ -0.2
CDH11P55287 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.82□□□□□ -0.2
CDH11P55287 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.82□□□□□ -0.2
CDH11P55287 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH11P55287 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH11P55287 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH11P55287 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CDH11P55287 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
CDH11P55287 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms