Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
BRPF1P55201 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.04■□□□□ 0.64
BRPF1P55201 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BRPF1P55201 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.04■□□□□ 0.64
BRPF1P55201 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.04■□□□□ 0.64
BRPF1P55201 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.04■□□□□ 0.64
BRPF1P55201 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.04■□□□□ 0.64
BRPF1P55201 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.04■□□□□ 0.64
BRPF1P55201 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.04■□□□□ 0.64
BRPF1P55201 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.04■□□□□ 0.64
BRPF1P55201 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.04■□□□□ 0.64
BRPF1P55201 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
BRPF1P55201 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.04■□□□□ 0.64
BRPF1P55201 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.04■□□□□ 0.64
BRPF1P55201 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.04■□□□□ 0.64
BRPF1P55201 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.04■□□□□ 0.64
BRPF1P55201 AC073413.1-201ENST00000603927 732 ntBASIC19.04■□□□□ 0.64
BRPF1P55201 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
BRPF1P55201 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
BRPF1P55201 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 AC005912.2-201ENST00000619492 2400 ntBASIC19.04■□□□□ 0.64
BRPF1P55201 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.04■□□□□ 0.64
BRPF1P55201 AC092135.3-201ENST00000624151 1846 ntBASIC19.04■□□□□ 0.64
BRPF1P55201 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BRPF1P55201 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.04■□□□□ 0.64
BRPF1P55201 AP001267.2-201ENST00000532619 2086 ntBASIC19.04■□□□□ 0.64
BRPF1P55201 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRPF1P55201 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.03■□□□□ 0.64
BRPF1P55201 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
BRPF1P55201 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.03■□□□□ 0.64
BRPF1P55201 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
BRPF1P55201 MIR663B-201ENST00000408361 115 ntBASIC19.03■□□□□ 0.64
BRPF1P55201 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 HCG24-202ENST00000414398 717 ntTSL 3 BASIC19.03■□□□□ 0.64
BRPF1P55201 FAM8A4P-201ENST00000435433 1213 ntBASIC19.03■□□□□ 0.64
BRPF1P55201 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 AC006033.1-201ENST00000440505 426 ntBASIC19.03■□□□□ 0.64
BRPF1P55201 IGHJ2P-201ENST00000454480 60 ntBASIC19.03■□□□□ 0.64
BRPF1P55201 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.03■□□□□ 0.64
BRPF1P55201 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.03■□□□□ 0.64
BRPF1P55201 RN7SL713P-201ENST00000582127 302 ntBASIC19.03■□□□□ 0.64
BRPF1P55201 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 AC138951.2-201ENST00000623455 1161 ntBASIC19.03■□□□□ 0.64
BRPF1P55201 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 AC008687.7-202ENST00000637404 953 ntBASIC19.03■□□□□ 0.64
BRPF1P55201 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.03■□□□□ 0.64
BRPF1P55201 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BRPF1P55201 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRPF1P55201 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
BRPF1P55201 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.03■□□□□ 0.64
BRPF1P55201 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BRPF1P55201 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRPF1P55201 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRPF1P55201 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.02■□□□□ 0.64
BRPF1P55201 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC19.02■□□□□ 0.64
BRPF1P55201 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
BRPF1P55201 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRPF1P55201 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms