Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCKAP1LP55160 FAM21FP-201ENST00000426241 1131 ntBASIC16.36■□□□□ 0.21
NCKAP1LP55160 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NCKAP1LP55160 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 AL583810.1-201ENST00000553344 1045 ntBASIC16.36■□□□□ 0.21
NCKAP1LP55160 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCKAP1LP55160 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCKAP1LP55160 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NCKAP1LP55160 AL136172.1-201ENST00000598590 1394 ntBASIC16.36■□□□□ 0.21
NCKAP1LP55160 AL023775.1-201ENST00000454907 1746 ntBASIC16.36■□□□□ 0.21
NCKAP1LP55160 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCKAP1LP55160 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCKAP1LP55160 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCKAP1LP55160 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 RPS2P32-201ENST00000439199 892 ntBASIC16.35■□□□□ 0.21
NCKAP1LP55160 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 AC010328.2-201ENST00000597698 1111 ntBASIC16.35■□□□□ 0.21
NCKAP1LP55160 AC009542.2-202ENST00000619004 1067 ntBASIC16.35■□□□□ 0.21
NCKAP1LP55160 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NCKAP1LP55160 LINC02228-204ENST00000642115 2962 ntBASIC16.35■□□□□ 0.21
NCKAP1LP55160 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCKAP1LP55160 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 AP002414.2-201ENST00000591780 3365 ntBASIC16.34■□□□□ 0.21
NCKAP1LP55160 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 AC010141.1-201ENST00000411585 623 ntBASIC16.34■□□□□ 0.21
NCKAP1LP55160 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 PUDPP3-201ENST00000445368 636 ntBASIC16.34■□□□□ 0.21
NCKAP1LP55160 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 MIR4741-201ENST00000579822 90 ntBASIC16.34■□□□□ 0.21
NCKAP1LP55160 EEF1DP1-201ENST00000585891 896 ntBASIC16.34■□□□□ 0.21
NCKAP1LP55160 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCKAP1LP55160 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NCKAP1LP55160 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.33■□□□□ 0.21
NCKAP1LP55160 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
NCKAP1LP55160 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.33■□□□□ 0.21
NCKAP1LP55160 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms