Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.2■□□□□ 0.5
NUP98P52948 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NUP98P52948 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.2■□□□□ 0.5
NUP98P52948 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.2■□□□□ 0.5
NUP98P52948 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.2■□□□□ 0.5
NUP98P52948 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.2■□□□□ 0.5
NUP98P52948 MIR2392-201ENST00000584881 84 ntBASIC18.2■□□□□ 0.5
NUP98P52948 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
NUP98P52948 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.2■□□□□ 0.5
NUP98P52948 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NUP98P52948 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.2■□□□□ 0.5
NUP98P52948 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NUP98P52948 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NUP98P52948 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.19■□□□□ 0.5
NUP98P52948 AJ011931.1-201ENST00000618749 2492 ntBASIC18.19■□□□□ 0.5
NUP98P52948 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 MIR645-201ENST00000385283 94 ntBASIC18.19■□□□□ 0.5
NUP98P52948 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.19■□□□□ 0.5
NUP98P52948 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.19■□□□□ 0.5
NUP98P52948 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.19■□□□□ 0.5
NUP98P52948 AC103810.10-201ENST00000606504 343 ntBASIC18.19■□□□□ 0.5
NUP98P52948 AC087392.5-201ENST00000612517 489 ntBASIC18.19■□□□□ 0.5
NUP98P52948 AL591471.1-201ENST00000621855 229 ntBASIC18.19■□□□□ 0.5
NUP98P52948 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.19■□□□□ 0.5
NUP98P52948 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
NUP98P52948 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.19■□□□□ 0.5
NUP98P52948 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.19■□□□□ 0.5
NUP98P52948 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP98P52948 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NUP98P52948 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.19■□□□□ 0.5
NUP98P52948 AC138701.2-201ENST00000553634 226 ntBASIC18.19■□□□□ 0.5
NUP98P52948 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.19■□□□□ 0.5
NUP98P52948 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.19■□□□□ 0.5
NUP98P52948 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NUP98P52948 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUP98P52948 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUP98P52948 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUP98P52948 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.18■□□□□ 0.5
NUP98P52948 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NUP98P52948 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NUP98P52948 AL591122.2-201ENST00000624125 1853 ntBASIC18.18■□□□□ 0.5
NUP98P52948 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NUP98P52948 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 DUX4L50-201ENST00000455245 715 ntBASIC18.18■□□□□ 0.5
NUP98P52948 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.18■□□□□ 0.5
NUP98P52948 CR383656.3-201ENST00000551315 183 ntBASIC18.18■□□□□ 0.5
NUP98P52948 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUP98P52948 AL161773.1-201ENST00000624845 863 ntBASIC18.18■□□□□ 0.5
NUP98P52948 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NUP98P52948 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP98P52948 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NUP98P52948 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP98P52948 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUP98P52948 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP98P52948 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms